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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905269.1_cds_XP_016455471.1_49399
CDS Infomation

[gene=LOC107779535] [db_xref=GeneID:107779535] [protein=uncharacterized protein LOC107779535 isoform X3] [protein_id=XP_016455471.1] [location=complement(join(66614..66733,68225..68425,68932..69135,69473..69601,70122..70790,71104..71411,72217..72484))] [gbkey=CDS]
Sequence

ATGGCCTCAGGAGGGAAAGGAATGTTGGAGAAGGGGAAGAGATGTTTGAAAATTGTATAT
TTCATGGTGGCGATGTTAGCGTCGCTGTTGGTACTATCGGCGCCACTGCTTGTGGCAATA
GGGGATGTATTGGTACCAAGTGTGTTGATTTCGAGCTTCACGTGCATGAAATGTTACAGT
TTCAAAGAGCATTTGCGTAGATATGCTTTCAAAAGCTCCTTGACGGACATTCCTCTCGTT
TCTGTCATGAGATCTCTTATCATCACCTGTGTTTATTCTTTGTGCGACGGCCCTGCACTT
TCACATGGACCATACCTTGCAACGGTTACATTCTGTTCCATCATTTCCGTGATTCTTCTT
TCTATCAAGGCTTGTGTTTTCTCTGTCAATTCATACCTGGAGATTGAAGCTTCATCTTCT
ATCTCGAGGCAAAAGCTTCATTTGAAAAAGTCATGGGGGATGCCCGTGTTGTTTCTTTCT
TCGGTAGTCTTTGCTCTTGGACATACTGTAATTGCCTACAGAACAAGCTGTCGTGCAAGG
AGGAAGCTTTTGTTTCACCGAGTTGACCCAGAAGCTGTCCTTCCTTGCAAAGTTGTTTTC
TCTGCATACAGTAAGGTACCACGATCTCCAATTCCTGCGAATAAAACTAGAACTGAGAGT
GAAATGAGGAGAAAACTTGCAGGATCAGCTCATGAGGAGGGGGAAATCCCTGCTATATTG
CTTGCTGATGTTGACAGTTCATTCATTTCTTGTCTTGGGCTCTCTCTTCATTACAAACTT
TGCTTGCCTGGCTCACCTTACCGTTTATCCTCCACAACTTCTTCTGCTAGTCCGTTGCAT
GTTTTGTCAAAAAGTGATTATCGTATTAGGAGGAGCTACAGTAGTCAATTTCATACCAAC
TCTCTCTATGTACCTCTTTTAGATGTGTCTCCAACTTCCCCAGTCCTGTCTGGAGAAATC
CCTAGTTTCAGCCTAGATGAAACTGGTGATGAAGATGAAATTGGTAAGTTGGGGTCTTCA
CCCCCAATACGAGATGTAGAAGGAAATAATCAGTTTGGAATTGTTCTAGTTCACGGTTTT
GGAGGTGGGGTTTTCTCTTGGAGAAATGTGATGGGTGAGCTAGCTCAACAGGTAGGTTGT
GCAGTCACTGCCTTTGACAGGCCAGGATGGGGATTGACATCTAGGCCACGTCAGAGAGAC
TGGGAGGAAAATCAATTGCCTAATCCGTACAGGATCGATAGTCAGGTTGACCTGCTCCTC
TCTTTCTGTTCGGATATGGGTTTTACTTCAGTTATACTTGTTGGTCATGACGATGGTGGA
TTGCTTGCTCTGAAGGCTGCACAAAGAGTTCAGTCATCCGCAAATTCGATTAATGTCCAT
ATCAAGGGGATTGTATTAATGGGTGTCAGCCTGTCAAGAGAACTGGTTCCAGCCTTTGCA
AGGATATTACTGCGTACGTCTCTTGGAAAAAAGCACTTGGTGCGTCCACTATTGCGAACA
GAAATTACTCAAGTTGTTAATAGACGTGCATGGTATGATGCCACCAAGTTGACAACGGAA
GTTTTGGGCCTATACAAGGCACCATTATGCGTTGAAGGATGGGATGAAGCACTCCATGAG
ATAGGAAAACATTCATCTGAAACAGTCCTCTCACCAGAAAATGCGGCGCAACTGCTAAAA
ACAGTTGAAAGTTTACCACTTCTGGTGATTGGAGGTGCTGAAGATTCACTTGTACCTATA
AAATCTGTTCAAATAATGGCATCAAAACTTGTAAATTCTAGACTGGTCGCCATATCTGGC
TGTGGACATCTTCCACATGAGGAATGTCCCAAAGCATTGCTAGCAGCCATGTCGCCATTC
ATCAATAGAATTTTAGTGGAACCACAACTGCAACATTAA

Peptide Sequence

PEP ID

XP_016455471.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107779535 isoform X3 [Nicotiana tabacum]
Sequence

MASGGKGMLEKGKRCLKIVYFMVAMLASLLVLSAPLLVAIGDVLVPSVLISSFTCMKCYS
FKEHLRRYAFKSSLTDIPLVSVMRSLIITCVYSLCDGPALSHGPYLATVTFCSIISVILL
SIKACVFSVNSYLEIEASSSISRQKLHLKKSWGMPVLFLSSVVFALGHTVIAYRTSCRAR
RKLLFHRVDPEAVLPCKVVFSAYSKVPRSPIPANKTRTESEMRRKLAGSAHEEGEIPAIL
LADVDSSFISCLGLSLHYKLCLPGSPYRLSSTTSSASPLHVLSKSDYRIRRSYSSQFHTN
SLYVPLLDVSPTSPVLSGEIPSFSLDETGDEDEIGKLGSSPPIRDVEGNNQFGIVLVHGF
GGGVFSWRNVMGELAQQVGCAVTAFDRPGWGLTSRPRQRDWEENQLPNPYRIDSQVDLLL
SFCSDMGFTSVILVGHDDGGLLALKAAQRVQSSANSINVHIKGIVLMGVSLSRELVPAFA
RILLRTSLGKKHLVRPLLRTEITQVVNRRAWYDATKLTTEVLGLYKAPLCVEGWDEALHE
IGKHSSETVLSPENAAQLLKTVESLPLLVIGGAEDSLVPIKSVQIMASKLVNSRLVAISG
CGHLPHEECPKALLAAMSPFINRILVEPQLQH

Transcript Sequence

Gene sequence data has not been registered.